Plot Tocky Clusters — PlotTockyClustering • TockyDevelopment

Plot Tocky Clusters

Usage

PlotTockyClustering(
  x,
  jpeg = FALSE,
  max_cells_displayed = 30000,
  filename = NULL
)

Arguments

x: A TockyPrepData after running the function TockyClustering This function will generate PCA plots with cluster and Angle data
jpeg: Whether to out a jpeg file. The default is pdf = FALSE, by which a jpeg file is produced.
max_cells_displayed: The number of cells displayed in plots.
filename: A character string for file name

Value

The slot Reduction will contain the new slot Tocky_clusters, which includes kmeans clustering result

Examples

if (FALSE) { # \dontrun{
PlotTockyClustering(x)
} # }