news

Feb 09, 2025 πŸ“„ New Paper Published 🌟 Excited to share my new publication on TockyPrep, now published in BMC BioinformaticsπŸš€ The TockyPrep R package automates and standardizes flow cytometric analysis of Fluorescent Timer reporters, unlocking the analysis of Nr4a3 Tocky mice and other Timer reporters🐭
Dec 01, 2024 πŸ“„ New Paper Published: πŸš€ Thrilled to share our latest research! Our study, β€œA multidimensional toolkit for elucidating temporal trajectories in cell development in vivo,” is now available in Development.
  • Masahiro Ono & Tessa Crompton. A multidimensional toolkit for elucidating temporal trajectories in cell development in vivo. Development 2024; dev.204255. doi: https://doi.org/10.1242/dev.204255 πŸ”¬πŸ§¬
The computational package TockyDevelopment is available at the GitHub Document. Read my blog entry.
Nov 15, 2024 πŸ’» New R Package Released – TockyLocus: Our second Tocky package has been released at our GitHube site! TockyLocus is essential for quantitative analysis of Fluorescent Timer data πŸ•’
  • Our preprint is accessible here 🌸
Nov 06, 2024 πŸ’» New R Package Released – TockyPrep: We have released the TockyPrep package, which offers data preprocessing methods for Tocky data (and any Fluorescent Timer data). Such data would not be fully useful without these proper analytic methods.
  • πŸ“„ Our preprint is accessible here 🌱
Nov 05, 2024 πŸ’» New R Package Released – GatingTree: A ground-breaking R package for analysing high-dimensional cytometry data without the use of dimensional reduction. πŸš€ This innovative approach allows for more precise and detailed data analysis, revolutionizing how we understand complex biological datasets.
Jun 13, 2024 πŸ“„ New Paper Published: Our review article on the relationship between Foxp3+ regulatory T cells and the human retrovirus infection. We show that T cells constitute a spectrum of self-reactivity and the activation mechanisms within self-reactive T cells are exploited by HTLV-1 infection.
Mar 25, 2024 πŸš€ A new website has launched! 🌐✨