Apply Gating Conditions

This function applies a set of gating conditions to flow cytometry data.

Usage

apply_gating_conditions(data, combinations_matrix, thresholds)

Arguments

data

A data frame or matrix containing flow cytometry data.

combinations_matrix

A matrix specifying the combinations of gating conditions.

thresholds

A vector of thresholds for the gating conditions.

Value

A matrix indicating whether each cell passes the gating conditions.

See also

Other GatingTree: GatingTreeToDF(), PlotDeltaEnrichment(), PlotDeltaEnrichmentPrunedTree(), PruneGatingTree(), addChildNode(), add_prune(), baseline_entropy(), calculate_enrichment(), calculate_entropy(), collect_all_enrichment(), collect_all_entropy(), collect_history(), collect_leaf_enrichment(), collect_markers(), convertToDataTree(), convert_to_diagrammer(), count_nodes(), createChildNode(), createGatingTreeObject(), findNodeByPath(), find_and_update_nodes(), gating_entropy(), general_node_rule(), generate_marker_names(), getNode(), prune_tree(), recursiveAddChildNode()

Examples

if (FALSE) { # \dontrun{
    gating_results <- apply_gating_conditions(marker_data, combinations_matrix, thresholds)
} # }